PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0055s0347.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 322aa    MW: 35554 Da    PI: 4.4826
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0055s0347.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY62.48.1e-20139197259
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          +D ++W+K Gq   k+s+f rsY++C+++ +C ++k v++++e p+ +++tY+g H h+
  Kaladp0055s0347.1.p 139 EDVWAWKKNGQNFTKDSPFLRSYFKCSTSeECFARKAVQQTSEVPEKFIVTYTGLHVHP 197
                          8*************************9988****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.1E-20128199IPR003657WRKY domain
PROSITE profilePS5081121.815133199IPR003657WRKY domain
SuperFamilySSF1182906.67E-18136199IPR003657WRKY domain
SMARTSM007747.5E-18138198IPR003657WRKY domain
PfamPF031063.4E-17139197IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MDNFNYDVHA QIGSSSSSKF SPGESCPFSV SDPTSFFLNV ETEVPFSYPE LDSIFDPQDA  60
ADQFDVFAPP IMKPCTTPSS DITTTTAATA VAAPSPCPKV EKSKARSPSF EEIYKQKLKK  120
KSSKKISSVH EVGDGKQIED VWAWKKNGQN FTKDSPFLRS YFKCSTSEEC FARKAVQQTS  180
EVPEKFIVTY TGLHVHPPPN TENPIRGCYK PLRAKRSMEG GGSSNNNASS SSSTMTNHQT  240
NDNFALTPVS SDYHHSSANT TFSEMMMYSS EGEVTEETRD DEVEELGEDL FLHDDVSGDA  300
SLGDEEFFDG IEELHTKYFC D*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.15e-19WRKY family protein